tcsBU statistics

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Citations per year

Number of citations per year for the bioinformatics software tool tcsBU

Tool usage distribution map

This map represents all the scientific publications referring to tcsBU per scientific context
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tcsBU specifications


Unique identifier OMICS_10439
Name tcsBU
Interface Web user interface
Restrictions to use None
Programming languages Javascript
License MIT License
Computer skills Basic
Stability Stable
Maintained Yes




  • person_outline António Múrias dos Santos

Publication for tcsBU

tcsBU citations


Morphological and molecular analyses of Anodontinae species (Bivalvia, Unionidae) of Lake Baikal and Transbaikalia

PLoS One
PMCID: 5890983
PMID: 29630628
DOI: 10.1371/journal.pone.0194944
call_split See protocol

[…] ataset for Anodonta anatina from Froufe et al. [], with a total of 125 COI sequences. A haplotype network was constructed using TCS 1.21 [] with a threshold of 95% and the output file was run through tcsBU []. Sequence divergences within the European haplogroup (uncorrected p-distance) were calculated using MEGA 7.0 []. Two distinct tools were used for this COI dataset to detect the number of Mole […]


Along for the ride or missing it altogether: exploring the host specificity and diversity of haemogregarines in the Canary Islands

PMCID: 5859493
PMID: 29554983
DOI: 10.1186/s13071-018-2760-5
call_split See protocol

[…] Additionally, phylogenetic networks for the clades containing Canarian haemogregarines were constructed using the statistical parsimony approach implemented in TCS [] and displayed graphically using tcsBU [].A hierarchical analysis of molecular variance (AMOVA) was performed to test the hypotheses regarding genetic structure among haemogregarine haplotypes, using islands and host species as varia […]


Digging up the roots of an insular hotspot of genetic diversity: decoupled mito nuclear histories in the evolution of the Corsican Sardinian endemic lizard Podarcis tiliguerta

BMC Evol Biol
PMCID: 5335832
PMID: 28253846
DOI: 10.1186/s12862-017-0899-x
call_split See protocol

[…] s of divergence [] as we observed in the acm4 and mc1r datasets. Networks were constructed under the 95% probability criterion for a parsimonious connection and represented graphically using the tool tcsBU []. Additionally, since mc1r sequences are available in GenBank for other Podarcis species, we combined them with sequence data from the present study to examine the phylogenetic relationships o […]

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tcsBU institution(s)
Faculdade de Ciências da Universidade do Porto, Porto, Portugal; CIBIO, Centro de Investigação em Biodiversidade e Recursos Genéticos, Campus Agrário de Vairão, Portugal

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