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Template-O-Matic specifications


Unique identifier OMICS_16352
Name Template-O-Matic
Software type Toolkit/Suite
Interface Command line interface
Restrictions to use Academic or non-commercial use
Operating system Unix/Linux
Computer skills Advanced
Stability Stable
Maintained Yes



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  • person_outline Marko Wilke <>

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Publication for Template-O-Matic

Template-O-Matic in publications

PMCID: 5908894
PMID: 29707531
DOI: 10.3389/fped.2018.00103

[…] preprocessing was optimized based on recommendations in the cat12 toolbox manual. all the t1-weighted images were initially segmented using a customized tissue probability map (tpm) created with template-o-matic toolbox (tom8; imaging research center, cincinnati children’s hospital medical center, oh, usa) and normalized to a customized dartel-template created with spm12. customized dartel […]

PMCID: 5807981
PMID: 29467710
DOI: 10.3389/fneur.2018.00010

[…] using spm12 and computational anatomy toolbox (cat) based on matlab. briefly, high-resolution structural images were first normalized to a customized child-sized brain template generated using the template-o-matic toolbox and subsequently segmented into gray matter, white matter, and cerebrospinal fluid. using a projection-based thickness procedure, the cortical thickness was estimated, […]

PMCID: 5752094
PMID: 29322076
DOI: 10.1016/j.dib.2017.12.001

[…] demographic (such as age and gender ) and technical factors (such as field strength and data quality , ). as opposed to the previous application of this idea (and its implementation within the template-o-matic toolbox ), the cerebromatic now uses a much more flexible statistical approach, namely multivariate adaptive regression splines . this allows modeling smooth trajectories of change […]

PMCID: 5715123
PMID: 29203800
DOI: 10.1038/s41598-017-17129-z

[…] ad potentials for 63,307 3 × 3 × 3 mm voxels using a boundary element model mesh that was constructed from age-appropriate montreal neurologic institute (mni) head model templates generated using the template-o-matic toolbox. activity in each hemisphere was evaluated by supressing the other hemisphere. peak activity in both the left (x ≤ −55 mm) and right (x ≥ 55 mm) auditory cortical areas (−35 ≤ […]

PMCID: 5683809
PMID: 29159054
DOI: 10.1016/j.nicl.2017.10.036

[…] − 80 to 10 ms (). because an internally implanted magnet precludes mri testing for implanted children, age-appropriate montreal neurologic institute (mni) head model templates created using the template-o-matic toolbox () were used to construct a 3-layer boundary element model (bem) mesh. this mesh accounted for age-dependent head geometry and tissue conductivities through the brain, skull […]

Template-O-Matic funding source(s)
This work has been supported by the Deutsche Forschungsgemeinschaft DFG (SFB550/C4) and by a BMBF research grant “Neuroimaging” (01EV0709).

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