0 user reviews
0 user reviews
Already have an account? Sign in to review this tool.
No review has been posted.
No open topic.
- Software type:
- Restrictions to use:
- Output data:
- The ranked list of the top genes.
- Computer skills:
- Command line interface
- Input data:
- A set of temporally aligned gene expression data.
- Programming languages:
- Source code URL:
(Radovic et al., 2017) Minimum redundancy maximum relevance feature selection approach for temporal gene expression data. BMC Bioinformatics.
Center for Data Analytics and Biomedical Informatics, College of Science and Technology, Temple University, Philadelphia, PA, USA; Bioengineering Research and Development Center - BioIRC, Kragujevac, Serbia; Mathematics Department, Faculty of Science, Ain Shams University, Cairo, Egypt; Center for Computational Health, IBM T.J. Watson Research Center, Cambridge, MA, USA; Faculty of Engineering, University of Kragujevac, Kragujevac, Serbia
This work was partially supported by the Defense Advanced Research Projects Agency (DARPA) and the Army Research Office (ARO) under Contract No. W911NF-16-C-0050, by DARPA grant No. 66001-11-1-4183 negotiated by SSC Pacific grant, and Serbian Ministry of Education, Science and Technological Development grants III41007 and ON174028.
Related Time course tools
Analyses sparse and heterogeneous time course data with high detection…
Analyses sparse and heterogeneous time course data with high detection sensitivity and transparency. TTCA is specifically designed for the analysis of perturbation responses. It combines different…
Allows for capturing important features of the gene dynamic behaviour.…
Allows for capturing important features of the gene dynamic behaviour. SwitchFinder is a statistical method for the analysis of time-series data, in particular gene expression data, based on a…
An integrated software platform for the analysis of microarray gene expression…
An integrated software platform for the analysis of microarray gene expression data. EXPANDER is designed to support all the stages of microarray data analysis, from raw data normalization to…
Captures single impulse-like progression patterns in high throughput time…
Captures single impulse-like progression patterns in high throughput time series datasets. ImpulseDE can be applied on any kind of high throughput gene expression data. It reports differentially…
A software program specifically designed for the analysis of short time series…
A software program specifically designed for the analysis of short time series microarray gene expression data. STEM implements unique methods to cluster, compare, and visualize such data. STEM also…