TERIUS specifications

Information


Unique identifier OMICS_28107
Name TERIUS
Alternative name Translationdependent Ensemble classifier with RIbosome and UPF1 association Score
Software type Application/Script
Interface Command line interface
Restrictions to use None
Input data Some Ribo-seq, UPF1 CLIP-seq and RNA-seq; and an annotation file of the transcripts.
Input format refFlat
Operating system Unix/Linux
Programming languages Python
Computer skills Advanced
Version 1.0.1
Stability Stable
Requirements
SAMtools, Numpy, Rpy, R
Source code URL http://big.hanyang.ac.kr/CASOL/download/TERIUS.1.0.1.tar
Maintained Yes

Versioning


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Maintainers


  • person_outline Jin-Wu Nam <>
  • person_outline Seo-Won Choi <>

Additional information


https://bigterius.wordpress.com/%EB%AC%B8%EC%9D%98/

Publication for Translationdependent Ensemble classifier with RIbosome and UPF1 association Score

TERIUS institution(s)
Department of Life Science, College of Natural Sciences, Hanyang University, Seoul, Korea; Research Institute for Convergence of Basic Sciences, Hanyang University, Seoul, Korea
TERIUS funding source(s)
Supported by the Program for Agriculture Science & Technology Development [PJ01045303] of the Rural Development Administration, and the Korea Health Technology R&D Project through the Korea Health Industry Development Institute with funding from Ministry of Health and Welfare [HI15C3224, HI15C1578].

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