TF2Network statistics

info info

Citations per year


Popular tool citations

chevron_left Gene regulatory network inference chevron_right

Tool usage distribution map

Tool usage distribution map
info info

Associated diseases

Associated diseases
Want to access the full stats & trends on this tool?

TF2Network specifications


Unique identifier OMICS_25424
Name TF2Network
Software type Application/Script
Interface Web user interface
Restrictions to use None
Input data A set of co-regulated, co-expressed or functionally related Arabidopsis genes.
Output data A list of regulators and the associated target genes, together with the enrichment statistics for each motif and information about co-expression between the input genes and the predicted regulator.
Computer skills Basic
Stability Stable
Maintained Yes


  • Plants and Fungi
    • Arabidopsis thaliana


  • person_outline Klaas Vandepoele <>

Additional information

Publication for TF2Network

TF2Network citation


Identification of regulatory modules in genome scale transcription regulatory networks

PMCID: 5732458
PMID: 29246163
DOI: 10.1186/s12918-017-0493-2

[…] tf-target interaction data for plant research []. co-expression and tf-binding site based prediction is another approach to infer tf-target interactions, which has been successfully implemented in tf2network []. these experimentally identified or predicted gene regulatory networks typically contain thousands of nodes and thousands to millions of edges (fig. ) [, ], which provide much […]

Want to access the full list of citations?
TF2Network institution(s)
Ghent University, Department of Plant Biotechnology and Bioinformatics, Ghent, Belgium; VIB Center for Plant Systems Biology, Ghent, Belgium; Bioinformatics Institute Ghent, Ghent University, Ghent, Belgium
TF2Network funding source(s)
Supported by Research Foundation–Flanders [G001015N]; Agency for Innovation by Science and Technology (IWT) in Flanders (predoctoral fellowship).

TF2Network reviews

star_border star_border star_border star_border star_border
star star star star star

Be the first to review TF2Network