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Transcription Factor-DNA Interaction Data deposITory TFinDIT

Online

A relational database and a web search tool for studying transcription factor-DNA interactions. The database contains annotated transcription factor-DNA complex structures and related data, such as unbound protein structures, thermodynamic data, and binding sequences for the corresponding transcription factors in the complex structures. TFinDit also provides a user-friendly interface and allows users to either query individual entries or generate datasets through culling the database based on one or more search criteria.

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TFinDIT classification

  • Animals
  • Fungi
  • Plants
  • Protists

TFinDIT specifications

Restrictions to use:
None
Community driven:
No
User data submission:
Not allowed
Database management system:
MySQL
Data access:
Browse
Maintained:
Yes

TFinDIT distribution

Credits

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Publications

Institution(s)

Department of Bioinformatics and Genomics, College of Computing and Informatics, University of North Carolina at Charlotte, Charlotte, NC, USA

Funding source(s)

This work was supported by the National Science Foundation #DBI0844749.

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