The Banana Genome Hub statistics
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Protocols
The Banana Genome Hub specifications
Information
| Unique identifier | OMICS_06476 |
|---|---|
| Name | The Banana Genome Hub |
| Restrictions to use | None |
| Database management system | MySQL |
| Community driven | No |
| Data access | File download, Browse |
| User data submission | Not allowed |
| Maintained | Yes |
Maintainer
- person_outline Gaëtan Droc
Publication for The Banana Genome Hub
The Banana Genome Hub
The Banana Genome Hub citations
(14)Extension modules for storage, visualization and querying of genomic, genetic and breeding data in Tripal databases
[…] ignificantly reduces the time and cost for database construction and management resulting in its increasing adoption by many communities. Some example databases using Tripal include GeneNetEngine (), the Banana Genome Hub (http://banana-genome.cirad.fr/) (), CottonGen (https://www.cottongen.org/) (), the Genome Database for Rosaceae (GDR, http://www.rosaceae.org) (), Knowpulse: Pulse Crop Genomics […]
Regulation of Banana Phytoene Synthase (MaPSY) Expression, Characterization and Their Modulation under Various Abiotic Stress Conditions
[…] The whole genome sequence of banana (Musa acuminata) was downloaded from the Banana Genome Hub database (D'Hont et al., ; http://banana-genome.cirad.fr/) and used for the identification of PSY gene. BLAST search was performed using annotated PSY sequences of maize (Zea may […]
Global Transcriptomic Analysis of Targeted Silencing of Two Paralogous ACC Oxidase Genes in Banana
[…] ACC oxidase plays a key role in ethylene biosynthesis for the conversion of ACC to ethylene []. However, 18 paralogs of ACC oxidase genes exist in the Banana Genome Hub using the Blastx tool. The contribution of each member of the ACC oxidase multigene family with respect to growth and development in banana life cycle remains to be elucidated. B […]
Evolutionary Expansion of WRKY Gene Family in Banana and Its Expression Profile during the Infection of Root Lesion Nematode, Pratylenchus coffeae
[…] The 153 Musa acuminata WRKY protein and nucleotide sequences were obtained from the Banana Genome Hub (http://banana-genome.cirad.fr/). Arabidopsis WRKY protein sequences were obtained as reference from The Arabidopsis Information Resource (TAIR). Complete CD sequences were separ […]
Genome wide Expression Analysis and Metabolite Profiling Elucidate Transcriptional Regulation of Flavonoid Biosynthesis and Modulation under Abiotic Stresses in Banana
[…] The whole genome sequence of banana (Musa acuminata) was downloaded from the Banana Genome Hub database (http://banana-genome.cirad.fr/). BLAST searches were performed using sequences of Zea mays, Oryza sativa, Arabidopsis thaliana, Populus tremuloides and Vitis vinifera a […]
Genome wide identification and expression profiling reveal tissue specific expression and differentially regulated genes involved in gibberellin metabolism between Williams banana and its dwarf mutant
[…] We searched two CPS-like complete cDNA sequences (MaCPS2 and MaCPS3) and one CPS-like (MaCPS1, GSMUA_Achr8T31500_001) fragment sequence in the Banana Genome Hub and then searched the complete cDNA sequence of MaCPS1 in NCBI. The three genes were all located in chromosome 8. MaCPS1 presented 98.54 and 84.27 % identities with MaCPS2 and Ma […]
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