TIF specifications


Unique identifier OMICS_03508
Name TIF
Alternative name Transposon Insertion Finder
Software type Application/Script, Package/Module
Interface Command line interface
Restrictions to use None
Input data Some short read sequences of a sequencer such as Illumina HiSeq2000.
Input format FASTQ
Operating system Unix/Linux
Programming languages Perl, Shell (Bash)
Computer skills Advanced
Stability Stable
Maintained Yes



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  • person_outline Akio Miyao <>

Publication for Transposon Insertion Finder

TIF institution(s)
Agrogenomics Research Center, National Institute of Agrobiological Sciences, Tsukuba, Japan
TIF funding source(s)
Supported by the Ministry of Agriculture, Forestry and Fisheries of Japan (Genomics for Agricultural Innovation, GIR-1004, Genomics-based Technology for Agricultural Improvement, IVG-1002, and Genome Information Database System for Innovation of Crop and Livestock Production, 001).

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