TIgGER specifications

Information


Unique identifier OMICS_07533
Name TIgGER
Alternative name Tool for Immunoglobulin Genotype Elucidation via Rep-Seq
Software type Package/Module
Interface Command line interface
Restrictions to use Academic or non-commercial use
Input data RepSeq sequencing reads
Output data A list of V/D/J alleles detected in sample
Biological technology Illumina, Roche
Operating system Unix/Linux, Mac OS, Windows
Programming languages R
Computer skills Advanced
Version 0.2.11
Stability Stable
Maintained Yes

Versioning


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Maintainer


  • person_outline Steven Kleinstein <>

Additional information


https://tigger.readthedocs.io/en/latest/

Publications for Tool for Immunoglobulin Genotype Elucidation via Rep-Seq

TIgGER institution(s)
Interdepartmental Program in Computational Biology and Bioinformatics, Yale University, New Haven, CT, USA; Bioengineering Program, Faculty of Engineering, Bar-Ilan University, Ramat Gan, Israel; Department of Pathology, Yale School of Medicine, Yale University, New Haven, CT, USA; Department of Neurology, Yale School of Medicine, Yale University, New Haven, CT, USA; Department of Immunobiology, Yale School of Medicine, Yale University, New Haven, CT, USA; Department of Biochemistry and Molecular Genetics, University of Louisville School of Medicine, Louisville, KY, USA

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