Unlock your biological data

?

Try: RNA sequencing CRISPR Genomic databases DESeq

1 - 12 of 12 results
filter_list Filters
language Programming Language
settings_input_component Operating System
tv Interface
computer Computer Skill
copyright License
1 - 12 of 12 results
edgeR / empirical analysis of DGE in R
star_border star_border star_border star_border star_border
star star star star star
(1)
Allows differential expression analysis of digital gene expression data. edgeR implements a range of statistical methodology based on the negative binomial distributions, including empirical Bayes estimation, exact tests, generalized linear models and quasi likelihood tests. The package and methods are general, and can work on other sources of count data, such as barcoding experiments and peptide counts.
maSigPro
Allows the analysis of multiple time course transcriptomics data. maSigPro is a regression based approach to find genes for which there are significant gene expression profile differences between experimental groups in time course microarray and RNA-Seq experiments. The software incorporates a clustering function to visualize genes with similar profiles. maSigPro was initially developed for microarrays and later updated to model count data. It includes Iso-maSigPro, a functionality to study differential isoform usage in time course RNA-seq experiments.
Trendy
Analyzes expression dynamics in high throughput profiling experiments with ordered conditions. Trendy provides statistical analyses and summaries of feature-specific and global expression dynamics. For each gene, this application fits a set of segmented regression models with varying numbers of breakpoints. It also included an R/Shiny application to visualize and explore expression dynamics for specific genes and the ability to extract genes containing user-defined patterns of expression.
0 - 0 of 0 results
1 - 4 of 4 results
filter_list Filters
computer Job seeker
Disable 1
person Position
thumb_up Fields of Interest
public Country
language Programming Language
1 - 4 of 4 results

By using OMICtools you acknowledge that you have read and accepted the terms of the end user license agreement.