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TISHunter specifications


Unique identifier OMICS_09990
Name TISHunter
Interface Web user interface
Restrictions to use None
Input data mRNA sequences in FASTA format
Computer skills Basic
Stability Stable
Maintained Yes


  • Primates
    • Homo sapiens


  • person_outline Li H.

Publication for TISHunter

TISHunter citations


Transductive learning as an alternative to translation initiation site identification

BMC Bioinformatics
PMCID: 5290616
PMID: 28152994
DOI: 10.1186/s12859-017-1502-6

[…] with isvm. the isvm and tsvm approaches were implemented in the transdutis tool, transdutis-i and transdutis-t respectively, available in a web interface. these approaches were compared with the tishunter, tis miner, netstart tools, presenting satisfactory results., in relation to precision, the results are similar for the isvm and tsvm classifiers. however, the results show […]


Representative transcript sets for evaluating a translational initiation sites predictor

BMC Bioinformatics
PMCID: 2712473
PMID: 19573244
DOI: 10.1186/1471-2105-10-206

[…] well demonstrated., in order to demonstrate the applicability of the proposed algorithm, we have employed several state-of-the-art predictors for further evaluation, including netstart [], cub [], tishunter [], startscan [], genscan [] and glimmerhmm [], where the first four software are specialized tis predictors and the latter two are designed to predict entire genes. nevertheless, […]

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TISHunter institution(s)
Department of Computer Science and Engineering, University of California, Riverside, CA, USA

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