TSAPA specifications

Unique identifier:
OMICS_26668
Software type:
Package/Module
Restrictions to use:
None
Programming languages:
R
Computer skills:
Advanced
Requirements:
e1071, TCC, seqinr, stringr, Biostrings, NuPoP, adabag, randomForest, Boruta, DMwR, GenomicFeatures
Name:
Tissue-Specific Alternative Polyadenylation sites
Interface:
Command line interface
Operating system:
Unix/Linux, Mac OS, Windows
License:
GNU General Public License version 2.0
Stability:
Stable
Maintained:
Yes

versioning

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TSAPA distribution

download

TSAPA support

Maintainer

  • Xiaohui Wu <>

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Credits

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Publications

Institution(s)

Department of Automation, Xiamen University, Xiamen, China; Key Laboratory of the Ministry of Education for Coastal and Wetland Ecosystems, College of the Environment and Ecology, Xiamen University, Xiamen, China; College of Mathematics and Computer Science, Fuzhou University, Fuzhou, China; Innovation Center for Cell Signaling Network, Xiamen University, Xiamen, China; Xiamen Research Institute of National Center of Healthcare Big Data, Xiamen, China

Funding source(s)

Supported by the National Natural Science Foundation of China (61673323), Natural Science Foundation of Fujian Province of China (2017J01068 and 2016J01295), Fundamental Research Funds for the Central Universities in China from Xiamen University (20720170076), and scholarship from China Scholarship Council (201606315010).

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