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TissueView specifications

Information


Unique identifier OMICS_05666
Name TissueView
Software type Toolkit/Suite
Interface Graphical user interface
Restrictions to use License purchase required
Operating system Unix/Linux
License Commercial
Computer skills Medium
Stability No
Maintained No

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TissueView in publications

 (8)
PMCID: 5701003
PMID: 29170521
DOI: 10.1038/s41598-017-16389-z

[…] (ca1, dentate gyrus molecular layer, dentate gyrus granular layer), and white matter (anterior corpus callosum and peri-ventricular corpus callosum)., maldi ims images were analyzed using tissueview software (version 2, sciex). a total of 4 tissue sections per brain were used to isolate discrete anatomical regions in order to quantify the 11 regions of interest, for a total of 160 […]

PMCID: 5413052
PMID: 28463983
DOI: 10.1371/journal.pone.0176254

[…] between data points are 75 μm. the mass spectrometric data were processed using a specialized script of analyst software (sciex) at a mass resolution of 0.1 amu and images were visualized using tissueview software (sciex). the imaging experiments were repeated with 3 different intracranial transplanted mice and rat brains. the gangliosides identified by maldi-msi are listed in ., cryostat […]

PMCID: 4625162
PMID: 26511533
DOI: 10.1038/srep15791

[…] between data points were 80 μm. the mass spectrometric data were processed using a specialized script of analyst software (ab sciex) at a mass resolution of 0.1 amu and images were visualized using tissueview software (ab sciex). after maldi imaging was completed, the glass coverslip containing the placenta section was carefully removed from the maldi plate, dipped in methanol to remove […]

PMCID: 4450996
PMID: 26034464
DOI: 10.1186/s12014-015-9079-4

[…] scanning 500–2500 m/z with a focus mass of 1250 m/z. for each ‘pixel’, 50 laser shots were fired at 1000hz., disk image files (.img) recorded by the 4800 imaging software were opened for analysis in tissueview v1.1 (applied biosystems). mass spectrometry images were extracted and normalized to total ion current (tic). the ims spectra were digitally superimposed on ihc imaged slides by using […]

PMCID: 3753243
PMID: 23991120
DOI: 10.1371/journal.pone.0072532

[…] tool software (www.maldi-msi.org, m. stoeckli, novartis pharma, basel, switzerland), spectra were acquired with an imaging raster of 75×75 microns, on at least 3 sections per tissue or organ., tissueview software 1.1 (ab sciex old connecticut path, framingham, ma 01701, usa) was used to process and display ions distribution inside the tumor sections. in ms experiments ptx and d5-ptx […]


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