Tmod statistics

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Citations per year

Number of citations per year for the bioinformatics software tool Tmod
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Tool usage distribution map

This map represents all the scientific publications referring to Tmod per scientific context
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Associated diseases

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Popular tool citations

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Tmod specifications

Information


Unique identifier OMICS_09250
Name Tmod
Alternative name Toolbox of Motif Discovery
Software type Toolkit/Suite
Interface Command line interface, Graphical user interface
Restrictions to use None
Operating system Windows
Computer skills Advanced
Version 1.1.1
Stability Stable
Maintained Yes

Versioning


No version available

Maintainer


  • person_outline Hongwei Xie

Publication for Toolbox of Motif Discovery

Tmod citation

library_books

Identification of conserved drought adaptive genes using a cross species meta analysis approach

2015
BMC Plant Biol
PMCID: 4417316
PMID: 25935420
DOI: 10.1186/s12870-015-0493-6

[…] sequences are not at adequate quality (i.e. < 800 bp or >200 N). Analysis of significantly overrepresented motifs within promoter sequences was conducted in BioProspector program [] integrated in the Tmod software []. To model the base dependencies of each species, the second-order Markov background models were constructed based on a random sample of 100 and 150 promoters, which are equivalent to […]


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Tmod institution(s)
Department of Automatic Control, College of Mechatronics and Automation, National University of Defense Technology, Changsha, Hunan, China; Department of Statistics, Harvard University, Cambridge, MA, USA

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