Tmod specifications

Information


Unique identifier OMICS_09250
Name Tmod
Alternative name Toolbox of Motif Discovery
Software type Toolkit/Suite
Interface Command line interface, Graphical user interface
Restrictions to use None
Operating system Windows
Computer skills Advanced
Version 1.1.1
Stability Stable
Maintained Yes

Versioning


Add your version

Maintainer


  • person_outline Hongwei Xie <>

Publication for Toolbox of Motif Discovery

Tmod in publication

PMCID: 4417316
PMID: 25935420
DOI: 10.1186/s12870-015-0493-6

[…] are not at adequate quality (i.e. < 800 bp or >200 n). analysis of significantly overrepresented motifs within promoter sequences was conducted in bioprospector program [] integrated in the tmod software []. to model the base dependencies of each species, the second-order markov background models were constructed based on a random sample of 100 and 150 promoters, which are equivalent […]


To access a full list of publications, you will need to upgrade to our premium service.

Tmod institution(s)
Department of Automatic Control, College of Mechatronics and Automation, National University of Defense Technology, Changsha, Hunan, China; Department of Statistics, Harvard University, Cambridge, MA, USA

Tmod reviews

star_border star_border star_border star_border star_border
star star star star star

Be the first to review Tmod