TMPad specifications

Information


Unique identifier OMICS_04183
Name TMPad
Alternative name TransMembrane Protein Helix-Packing Database
Restrictions to use None
Maintained No

Publication for TransMembrane Protein Helix-Packing Database

TMPad citations

 (2)
library_books

Phylogeny of the Vitamin K 2,3 Epoxide Reductase (VKOR) Family and Evolutionary Relationship to the Disulfide Bond Formation Protein B (DsbB) Family

2015
PMCID: 4555120
PMID: 26230708
DOI: 10.3390/nu7085281

[…] vation grades onto MSAs using JalView2.8 for analysis and graphical rendering. We further explored structural features corresponding to the conservation data revealed by ConSurf analysis by using the TMPad server (http://bio-cluster.iis.sinica.edu.tw/TMPad/) to visualize and determine residues involved in direct interhelical contacts from the representative X-ray crystallographic structures (PDB e […]

library_books

The observation of evolutionary interaction pattern pairs in membrane proteins

2015
BMC Struct Biol
PMCID: 4379700
PMID: 25887048
DOI: 10.1186/s12900-015-0033-5

[…] ded to derive interaction data information from a known database. Generally, such databases allow a rapid and simple access to the required data. Helix-helix interaction information were derived from TMPad, the TransMembrane Protein Helix-Packing Database []. TMPad is an integrated repository of experimentally determined structural folds derived from helix-helix interactions in α-helical membrane […]

TMPad institution(s)
Bioinformatics Laboratory, Institute of Information Science, Academia Sinica, Taipei, Taiwan, China

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