tmRDB statistics

info info

Citations per year

info

Tool usage distribution map

info info

Associated diseases

info

Popular tool citations

chevron_left tmRNA databases chevron_right
Want to access the full stats & trends on this tool?

tmRDB specifications

Information


Unique identifier OMICS_05587
Name tmRDB
Restrictions to use None
Maintained Yes

Maintainer


  • person_outline Christian Zwieb

Publication for tmRDB

tmRDB citations

 (2)
library_books

Comparative Genomic Analysis Shows That Avian Pathogenic Escherichia coli Isolate IMT5155 (O2:K1:H5; ST Complex 95, ST140) Shares Close Relationship with ST95 APEC O1:K1 and Human ExPEC O18:K1 Strains

2014
PLoS One
PMCID: 4232414
PMID: 25397580
DOI: 10.1371/journal.pone.0112048

[…] RNAmmer (http://www.cbs.dtu.dk/services/RNAmmer/), tRNA genes tRNAscan-SE Search Server (http://lowelab.ucsc.edu/tRNAscan-SE/), and tmRNA were annotated by tmRNA Database (http://rth.dk/resources/rnp/tmRDB/) with default parameters. […]

library_books

Comparative 3 D Modeling of tmRNA

2005
BMC Mol Biol
PMCID: 1168896
PMID: 15958166
DOI: 10.1186/1471-2199-6-14

[…] hen the phylogenetic order could not be determined, the sequence was placed next to the closest relative as determined by the ClustalW plug-in of BioEdit [,]. The sequences were made available at the tmRDB [].Aligning was done manually using BioEdit [] with details described previously []. Briefly, closely related sequences were aligned first. Then, invariant positions were used as guides to align […]


Want to access the full list of citations?
tmRDB institution(s)
Department of Molecular Biology, The University of Texas Health Science Center at Tyler, Tyler, TX, USA

tmRDB reviews

star_border star_border star_border star_border star_border
star star star star star

Be the first to review tmRDB