tnet statistics

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Citations per year

Number of citations per year for the bioinformatics software tool tnet

Tool usage distribution map

This map represents all the scientific publications referring to tnet per scientific context
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Associated diseases


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tnet specifications


Unique identifier OMICS_16864
Name tnet
Software type Package/Module
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux, Mac OS, Windows
Programming languages R
License Other
Computer skills Advanced
Version 3.0.14
Stability Stable
survival, igraph, R(≥2.13.0)
Source code URL
Maintained Yes


No version available



  • person_outline Tore Opsahl

tnet citations


Implications of the cattle trade network in Cameroon for regional disease prevention and control

Sci Rep
PMCID: 5339720
PMID: 28266589
DOI: 10.1038/srep43932

[…] ith approaches targeting markets belonging to the top 10th percentiles of each centrality measure. All analysis and graphics were performed in R statistical software (version 3.2.3) using the igraph, tnet, fitdistrplus, glm, raster, rgdal, circlize and ggplot2 packages. […]


Let 7i 5p represses brite adipocyte function in mice and humans

Sci Rep
PMCID: 4921928
PMID: 27345691
DOI: 10.1038/srep28613

[…] Cells were lysed in TNET lysis buffer (25 mM Tris-Cl (pH 7.4), 100 mM NaCl, 1mM EDTA, 1% Triton X-100, 0.5% Nonidet P40, 1× protease inhibitor cocktail and 1× Phosphostop mix (Roche Diagnostics, Meylan, France)). The pro […]


Modularized Evolution in Archaeal Methanogens Phylogenetic Forest

Genome Biol Evol
PMCID: 4986457
PMID: 25502908
DOI: 10.1093/gbe/evu259

[…] in R was adopted to implement the community identification based on random walks. Function of “modularity” in igraph was used to evaluate the community structure in the network.Tnet (), igraph and in-house Perl and R scripts were used for the weighted network analysis. Best fit degree distribution (ML estimation) was implemented using MASS package (), and in-house R scripts. […]

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