TRAMS specifications

Unique identifier:
OMICS_01924
Software type:
Package/Module
Restrictions to use:
None
Computer skills:
Advanced
Maintained:
Yes
Name:
Tool for Rapid Annotation of Microbial SNPs
Interface:
Command line interface
Operating system:
Unix/Linux
Stability:
Stable
  • Animals
    • Homo sapiens

versioning

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No versioning.

TRAMS support

Maintainer

  • Paul A. Hoskisson <>

forum

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No open topic.

Credits

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Publications

Institution(s)

Strathclyde Institute of Pharmacy and Biomedical Sciences, Glasgow, UK

User review

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1 user review

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1 user review

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Richard Haigh's avatar image

Richard Haigh

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Pros: Works quite well in Windows but I haven't got it onto our Linux system as our Python isn't new enough.
Cons: It doesn't accept data with INDELs which seems to be a dealbreaker for bacterial projects - though they are less frequent the INDELs are much more likely to result in a phenotype so for us the lack of this sort of annotation means we won't be using it. Pity.

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