TopHat-Recondition specifications


Unique identifier OMICS_12031
Name TopHat-Recondition
Software type Package/Module
Interface Command line interface
Restrictions to use None
Output data BAM file
Operating system Unix/Linux, Mac OS, Windows
Programming languages Python
License BSD 2-clause “Simplified” License
Computer skills Advanced
Stability Stable
Requirements PySam
Maintained Yes



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  • person_outline Lao H. Saal <>

Publication for TopHat-Recondition

TopHat-Recondition institution(s)
Division of Oncology and Pathology, Department of Clinical Sciences, Lund University Cancer Center, Lund University, Lund, Sweden
TopHat-Recondition funding source(s)
This work was supported by the Swedish Cancer Society, Swedish Research Council, Governmental Funding of Clinical Research within National Health Service, and Mrs. Berta Kamprad Foundation.

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