TOPPAS specifications

Information


Unique identifier OMICS_02640
Name TOPPAS
Alternative name The OpenMS Proteomics Pipeline Assistant
Software type Package/Module
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux
Computer skills Advanced
Stability Stable
Maintained Yes

Versioning


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Publication for The OpenMS Proteomics Pipeline Assistant

TOPPAS institution(s)
Applied Bioinformatics, Center for Bioinformatics and Quantitative Biology Center, University of Tübingen, Tübingen, Germany

TOPPAS review

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Marc Dubois

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Desktop
TOPPAS is a workflow editor based OpenMS library and thus enjoys all the algorithms developed within it. It is easy to learn, the interface is attractive. In short, we spend time tweaking its pipeline by changing a particular algorithm for peak picking or alignment of LC-MS maps for example.