Toucan specifications

Information


Unique identifier OMICS_06282
Name Toucan
Software type Package/Module
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux, Mac OS, Windows
Programming languages Java
Computer skills Advanced
Stability Stable
Maintained Yes

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Toucan articles

Toucan citation

2011
PMCID: 3040129

[…] searches for potential tfbss in a set of sequences using all the transfac vertebrate position-weigh matrices (pwms) [34]. the information of tfbs obtained from motifscanner was sent to the software toucan [23] for determination of pwms that were significantly over-represented., over-represented transcription factor binding site prediction tool (otfbs). this web-tool [35,36] searches […]

Toucan institution(s)
Laboratory of Neurogenetics, Department of Human Genetics, Flanders Interuniversity Institute for Biotechnology and K.U.Leuven Belgium; Bioinformatics group, Department of Electrical Engineering ESAT-SCD, K.U.Leuven Belgium; Human Genome Laboratory, Department of Human Genetics, Flanders Interuniversity Institute for Biotechnology and K.U.Leuven Belgium; Center for Biomolecular Medicine and Pharmacology, Department of Vascular Biology and Thrombosis Research, Medical University Vienna, and Biomolecular Therapeutics Vienna, Austria
Toucan funding source(s)
This work is partially supported by Instituut voor de aanmoediging van Innovatie door Wetenschap en Technologie in Vlaanderen (IWT) (STWW-00162, STWW-Genprom, GBOU-SQUAD-20160), Research Council KULeuven (GOA Mefisto-666, GOA-Ambiorics, IDO genetic networks), FWO (G.0115.01 and G.0413.03) and IUAP V-22.

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