Toxicogenomics focuses on assessing the safety of compounds using gene expression profiles. Gene expression signatures from large toxicogenomics databases are expected to perform better than small databases in identifying biomarkers for the prediction and evaluation of drug…
Web app
MARCARviz MARCARviz

MARCARviz

A web platform which allows simplified analysis of the data sets used and…

A web platform which allows simplified analysis of the data sets used and generated during the MARCAR project. Thus, it helps to identify potential biomarkers helping early detection of tumor…

Desktop app
Web app
BMDExpress Data Viewer BMDExpress Data Viewer

BMDExpress Data Viewer

A web-based application for visualizing and graphing BMDExpress output files.…

A web-based application for visualizing and graphing BMDExpress output files. BMDExpress applies BMD modeling to transcriptomic datasets to identify transcriptional BMDs. Through our case studies, we…

Chemical Effects in… Chemical Effects in Biological Systems

CEBS Chemical Effects in Biological Systems

Compiles individual and summary animal data from the National Toxicology…

Compiles individual and summary animal data from the National Toxicology Program (NTP) testing program and other depositors into a single electronic repository. CEBS contains over 11000 test articles…

Web app
Desktop app
Pharmacoepidemiology… Pharmacoepidemiology Instrumental Variable

PharmIV Pharmacoepidemiology Instrumental Variable

A formula necessary to calculate power for instrumental variable analysis with…

A formula necessary to calculate power for instrumental variable analysis with a single binary instrument, binary exposure and continuous outcome in the context of pharmacoepidemiology. PharmIV has…

Smoking Effects on… Smoking Effects on Gene Expression of Lung

SEGEL Smoking Effects on Gene Expression of Lung

An online web server for easy and fast visualization of smoking effects on…

An online web server for easy and fast visualization of smoking effects on human lung gene expression. SEGEL integrates 362 samples collected from eight public expression microarray data sets from…

ToxDB ToxDB

ToxDB

A resource that analyzes drug-induced gene expression changes at the pathway…

A resource that analyzes drug-induced gene expression changes at the pathway level. We have collected 2694 pathway concepts and computed numerical response scores of these pathways for 437 drugs and…

Data Infrastructure… Data Infrastructure for Chemical Safety Assessment

diXa Data Infrastructure for Chemical Safety Assessment

A robust and sustainable infrastructure storing toxicogenomics data. A central…

A robust and sustainable infrastructure storing toxicogenomics data. A central data warehouse is connected to a portal with links to chemical information and molecular and phenotype data. diXa is…

Web app
Toxygates Toxygates

Toxygates

An integrated platform for toxicogenomics data analysis. Toxygates combines a…

An integrated platform for toxicogenomics data analysis. Toxygates combines a large microarray dataset with the ability to fetch semantic linked data, such as pathways, compound-protein interactions…

Open Toxicogenomics… Open Toxicogenomics Project-Genomics Assisted…
Comparative… Comparative Toxicogenomics Database

CTD Comparative Toxicogenomics Database

Provides information about interactions between environmental chemicals and…

Provides information about interactions between environmental chemicals and gene products and their relationships to diseases. Chemical-gene, chemical-disease and gene-disease interactions manually…

Web app
LTMap LTMap

LTMap

A web server for evaluating the potential liver toxicity based on genome-wide…

A web server for evaluating the potential liver toxicity based on genome-wide transcriptomics data.

Advertisements
Join Omic Community

By using OMICtools you acknowledge that you have read and accepted the terms of the end user license agreement.