TPEA specifications

Information


Unique identifier OMICS_20395
Name TPEA
Alternative name Topology-based Pathway Enrichment Analysis
Software type Package/Module
Interface Command line interface
Restrictions to use None
Input data Some genes.
Operating system Unix/Linux, Mac OS, Windows
Programming languages R
License GNU General Public License version 2.0
Computer skills Advanced
Version 3.1.0
Stability Stable
Requirements
R(≥2.10), Matrix, utils, foreach, RCurl, igraph, XML, geepack, MESS, geeM
Source code URL https://cran.r-project.org/src/contrib/TPEA_3.1.0.tar.gz
Maintained Yes

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Versioning


No version available

Documentation


Maintainers


  • person_outline Wei Jiang
  • person_outline Bin Jiang

Publication for Topology-based Pathway Enrichment Analysis

TPEA institution(s)
The College of Bioinformatics Science and Technology at Harbin Medical University, China; College of Automation Engineering at Nanjing University of Aeronautics and Astronautics, China
TPEA funding source(s)
Supported by the National Natural Science Foundation of China (grant number: 61571169), Natural Science Foundation of Heilongjiang Province of China (grant number: QC2014C017) and University Nursing Program for Young Scholars with Creative Talents in Heilongjiang Province (grant number: UNPYSCT-2015037).

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