TPpred statistics

To access cutting-edge analytics on consensus tools, life science contexts and associated fields, you will need to subscribe to our premium service.

Subscribe
info

Citations per year

Citations chart
info

Popular tool citations

chevron_left Subcellular localization prediction chevron_right
Popular tools chart
info

Tool usage distribution map

Tool usage distribution map
info

Associated diseases

Associated diseases

TPpred specifications

Information


Unique identifier OMICS_05286
Name TPpred
Interface Web user interface
Restrictions to use None
Input data Protein sequence
Input format FASTA
Computer skills Basic
Version 3.0
Stability Stable
Maintained Yes

Maintainer


  • person_outline Pier Luigi Martelli <>

Publications for TPpred

TPpred in publications

 (5)
PMCID: 5874029
PMID: 29590215
DOI: 10.1371/journal.pone.0194487

[…] the similarity to known proteins (e.g., homologs of bacteria)., the presence of mitochondria-targeting signals in the proteins in question were evaluated using three different programs—mitofates, tppred2 and targetp and ipsort [–]. the n-termini of the predicted proteins were manually curated using the genome and transcriptome data. if n-termini of the proteins predicted from genome data […]

PMCID: 5288566
PMID: 28168222
DOI: 10.1128/mSphere.00229-16

[…] a single band at the predicted size of ~54 kda, and an ifa revealed localization to the parasite’s mitochondrion (). although there was no mitochondrial targeting sequence predicted by either tppred2 () or targetp 1.1 (), the mitochondrial localization of tgprelid is consistent with the localization of homologous human and yeast preli domain-containing proteins in the intermembrane […]

PMCID: 5039597
PMID: 27681931
DOI: 10.3390/microorganisms4030037

[…] using graphpad prism version 5.02 (graphpad software, san diego, ca, usa)., mtps predictions on bpl1, bio2, bio3, bio4, and bio32 were performed by using psort ii [] server, mitofates [] server, tppred 2.0 [] server and targetp [] server. standard settings were used for all four predictors., the chemically defined media commonly used to achieve germ tube formation (gtf) in c. albicans […]

PMCID: 4997694
PMID: 27557948
DOI: 10.1186/s12862-016-0738-5

[…] [], we examined this fpl for targeting peptides. although the ctenophore fpls have a conserved n-terminal motif that alternates between charged and non-polar residues, neither signalp nor tppred2 predicted secretory or mitochondrial targeting based on this motif [, ]. fig. 1fig. 2, when the m. leidyi fpl was aligned to a. victoria fp, the most striking difference […]

PMCID: 3667845
PMID: 23737942
DOI: 10.1371/journal.pone.0062608

[…] defoliation significantly reduced the growth of mikania compared to the plants of the species grown without competition and defoliation (). the tptrue values were all significantly higher than the tppred values, regardless of the intensity with which mikania was defoliated, indicating an antagonistic interactive effect between competition and defoliation on the growth of mikania (). […]


To access a full list of publications, you will need to upgrade to our premium service.

TPpred institution(s)
Biocomputing Group, University of Bologna, Bologna; Giorgio Prodi Interdepartmental Center for Cancer Research, University of Bologna, Bologna; Department of Biology; Department of Computer Science and Engineering, University of Bologna, Bologna, Italy

TPpred reviews

star_border star_border star_border star_border star_border
star star star star star

Be the first to review TPpred