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TpsRegr specifications

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Unique identifier OMICS_34274
Name TpsRegr
Software type Application/Script
Interface Command line interface
Restrictions to use None
Operating system Windows
Computer skills Advanced
Version 1.45
Stability Stable
Maintained Yes

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TpsRegr citations

 (37)
library_books

Parallel body shape divergence in the Neotropical fish genus Rhoadsia (Teleostei: Characidae) along elevational gradients of the western slopes of the Ecuadorian Andes

2017
PLoS One
PMCID: 5489170
PMID: 28658255
DOI: 10.1371/journal.pone.0179432

[…] modeled in Thin-plate spline version 1.20 [] by depicting the landmark displacements necessary to transform the consensus configuration of R. altipinna into that of R. minor.MANCOVA was conducted in tpsRegr 1.40 [] to examine the contributions of allometry (shape variation associated with differences in body size—centroid size log10 transformed), drainage (Esmeraldas, Guayas/Other, Jubones, and S […]

call_split

Quantitative Association Between Peripapillary Bruch's Membrane Shape and Intracranial Pressure

2017
PMCID: 5455169
PMID: 28549088
DOI: 10.1167/iovs.17-21592
call_split See protocol

[…] t-LP for both eyes of each participant) arranged using TPSutil. Outputs included the 28 independent PCs that characterize the group of pp-BM shapes and the scalar variable for each PC for each image. TPSregr was used to compare the pp-BM shapes of the pre-LP images between the right eyes of all participants as a function of ICP. TPSregr was used to compare the change in pp-BM shapes within partici […]

library_books

Patterns of correlation of facial shape with physiological measurements are more integrated than patterns of correlation with ratings

2017
Sci Rep
PMCID: 5368612
PMID: 28349947
DOI: 10.1038/srep45340

[…] these shape regressions in development versus perceptual processes.We used F. James Rohlf’s computer programs tpsUtil and tpsDig2 for landmark digitization, tpsRelw for sliding of the semilandmarks, tpsRegr for the shape regressions, and tpsSuper for the image unwarping and averaging. The analysis of spatial scaling was carried out in S-Plus. […]

library_books

Ecomorphological inferences in early vertebrates: reconstructing Dunkleosteus terrelli (Arthrodira, Placodermi) caudal fin from palaeoecological data

2017
PeerJ
PMCID: 5723140
PMID: 29230354
DOI: 10.7717/peerj.4081

[…] s in caudal fin morphology (two additional landmarks were considered for the analysis of active pelagic sharks, ). For that, a permutation test (number of permutations = 10,000) was carried out using tpsRegr v.1.4.1 () and MorphoJ software v. 1.06d (). The expected caudal fin morphology of D. terrelli was inferred from its total body length estimates (see below) by interpolation in the regression […]

library_books

A century of morphological variation in Cyprinidae fishes

2016
BMC Ecol
PMCID: 5073860
PMID: 27765030
DOI: 10.1186/s12898-016-0104-x

[…] in the statistical language R (version 2.14.1, R Development Core Team, 2011) using the heplots [], fmsb [], geomorph [], and base stats packages. Thin plate spline deformation grids [] (produced in tpsRegr []) were used to visualize shape variation indicated in MANCOVA models. Alpha was 0.05 for all tests of significance. […]

library_books

Predator induced phenotypic plasticity of shape and behavior: parallel and unique patterns across sexes and species

2016
PMCID: 5804186
PMID: 29491997
DOI: 10.1093/cz/zow072

[…] ing) factor for each sex. Interacting factors that were not significant (P < 0.05) were removed and the reduced model was used. DFA scores were then visualized in terms of landmark deformations using tpsRegr (Ver. 1.40, Rohlf and SUNY). […]

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TpsRegr institution(s)
Stony Brook University, New York, NY, USA

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