TraceViewer statistics

Tool stats & trends

Looking to identify usage trends or leading experts?

TraceViewer specifications


Unique identifier OMICS_01822
Name TraceViewer
Software type Application/Script
Interface Graphical user interface
Restrictions to use Academic or non-commercial use
Input format ABI,SCF
Operating system Unix/Linux
Programming languages Java
Computer skills Medium
Stability Stable
Maintained Yes


No version available


  • person_outline TraceViewer Team

Additional information

This tool has been replaced by CodonCode Aligner for Windows and MacOS users.

TraceViewer citations


Compounds that enhance the tailing activity of Moloney murine leukemia virus reverse transcriptase

Sci Rep
PMCID: 5529421
PMID: 28747695
DOI: 10.1038/s41598-017-04765-8

[…] -containing GeneScan–500 LIZ Size Standard (Thermo Fisher Scientific, USA), which contains 16 fragments of known size, and size-separated in a 3130xl Genetic Analyzer (Thermo Fisher Scientific, USA). TraceViewer software was used to analyze the data, in which it aligned different run data by using two peaks from the size standard. […]


Efficient N tailing of blunt DNA ends by Moloney murine leukemia virus reverse transcriptase

Sci Rep
PMCID: 5288710
PMID: 28150748
DOI: 10.1038/srep41769

[…] A length analyses that use DNA-modifying enzymes. Suitable computational tools may have not yet to be developed for this purpose. To facilitate such analyses, we developed a computational tool called TraceViewer, which reads trace data in ABIF format and calibrates runs using the mobility of two user-selected internal control fragments of different sizes that flank the peaks of interest. By using […]


Elucidating the diet of the island flying fox (Pteropus hypomelanus) in Peninsular Malaysia through Illumina Next Generation Sequencing

PMCID: 5391789
PMID: 28413729
DOI: 10.7717/peerj.3176

[…] XP beads (Beckman Coulter, Inc). The purified samples were sent to 1st BASE laboratories ( for Sanger sequencing. The sequencing results were quality trimmed using CodonCode TraceViewer ( and aligned using MAFFT version 7.0 ().A phylogenetic tree () was constructed to support morphology-based identification of site-specific reference […]


Looking to check out a full list of citations?

TraceViewer reviews

star_border star_border star_border star_border star_border
star star star star star

Be the first to review TraceViewer