TrackSM specifications


Unique identifier OMICS_29529
Name TrackSM
Software type Application/Script
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux
Computer skills Advanced
Stability Stable
Maintained Yes


No version available


  • person_outline iim03001
  • person_outline David Grant

Publication for TrackSM

TrackSM citation


From chromatogram to analyte to metabolite. How to pick horses for courses from the massive web resources for mass spectral plant metabolomics

PMCID: 5499862
PMID: 28520864
DOI: 10.1093/gigascience/gix037

[…] e analysis from cross-species and cross-tissue experiments through computation of similarity between individual MS/MS spectra and visualization of similarity based on interactive graphical tools, and TrackSM [] is a Java tool that uses molecular structure similarities to assign newly identified biochemical compounds to known metabolic pathways. […]

TrackSM institution(s)
Computer Science and Engineering Department, University of Connecticut, Storrs, CT, USA; Computer Science Department, Helwan University, Cairo, Egypt; Pharmaceutical Sciences Department, University of Connecticut, Storrs, CT, USA
TrackSM funding source(s)
Supported in part by NIH grant 1R01GM087714, the Agriculture and Food Research Initiative Competitive Grant no. 2011-67016-30331 from the USDA National Institute of Food and Agriculture, award IIS-0916948 from NSF, and the Booth Engineering Center for Advance Technology (BECAT) at the University of Connecticut.

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