TrackSM specifications

Information


Unique identifier OMICS_29529
Name TrackSM
Software type Application/Script
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux
Computer skills Advanced
Stability Stable
Maintained Yes

Versioning


No version available

Maintainers


  • person_outline iim03001
  • person_outline David Grant

Publication for TrackSM

TrackSM citation

library_books

From chromatogram to analyte to metabolite. How to pick horses for courses from the massive web resources for mass spectral plant metabolomics

2017
GigaScience
PMCID: 5499862
PMID: 28520864
DOI: 10.1093/gigascience/gix037

[…] e analysis from cross-species and cross-tissue experiments through computation of similarity between individual MS/MS spectra and visualization of similarity based on interactive graphical tools, and TrackSM [] is a Java tool that uses molecular structure similarities to assign newly identified biochemical compounds to known metabolic pathways. […]

TrackSM institution(s)
Computer Science and Engineering Department, University of Connecticut, Storrs, CT, USA; Computer Science Department, Helwan University, Cairo, Egypt; Pharmaceutical Sciences Department, University of Connecticut, Storrs, CT, USA
TrackSM funding source(s)
Supported in part by NIH grant 1R01GM087714, the Agriculture and Food Research Initiative Competitive Grant no. 2011-67016-30331 from the USDA National Institute of Food and Agriculture, award IIS-0916948 from NSF, and the Booth Engineering Center for Advance Technology (BECAT) at the University of Connecticut.

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