Trans-ABySS specifications

Information


Unique identifier OMICS_01326
Software type Application/Script, Package/Module
Interface Command line interface
Restrictions to use Academic or non-commercial use
Operating system Unix/Linux
Programming languages Python
Computer skills Advanced
Version 1.5.5
Stability Stable
Requirements ABySS, python-igraph, BLAT
Maintained Yes

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Documentation


Maintainers


  • person_outline Inanc Birol <>
  • person_outline Readman Chiu <>

Additional information


https://github.com/bcgsc/transabyss

Trans-ABySS article

Trans-ABySS institution(s)
Canada’s Michael Smith Genome Sciences Centre, British Columbia Cancer Agency, Vancouver, BC, Canada; Terry Fox Laboratory, British Columbia Cancer Agency, Vancouver, BC, Canada; Department of Medical Genetics, University of British Columbia, Vancouver, BC, Canada
Trans-ABySS funding source(s)
Supported, in part, by Genome Canada, Genome British Columbia, Michael Smith Foundation for Health Research and the Canadian Institute of Health Research (CIHR), including the CIHR Bioinformatics Training Program for Health Research.

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