TransComb specifications

Unique identifier:
OMICS_13290
Interface:
Graphical user interface
Input data:
Alignments of RNA-seq reads
Output data:
Assembled candidate transcripts
Operating system:
Unix/Linux
License:
GNU General Public License version 3.0
Version:
1.0
Maintained:
Yes
Software type:
Package/Module
Restrictions to use:
None
Input format:
BAM
Output format:
GTF
Programming languages:
C++
Computer skills:
Medium
Stability:
Stable
  • Fungi

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TransComb distribution

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TransComb support

Maintainer

  • Juntao Liu <>

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Credits

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Publications

Institution(s)

School of Mathematics, Shandong University, Jinan, China; Department of Computer Science and Engineering, University of California, Riverside, CA, USA; MOE Key Lab of Bioinformatics and Bioinformatics Division, TNLIST/Department of Computer Science and Technology, Tsinghua University, Beijing, China; Institute of Integrative of Genome Biology, University of California, Riverside, CA, USA

Funding source(s)

This work was partially supported by the National Natural Science Foundation of China (codes 61432010, 61272016, and 31571354) and the USA National Science Foundation (grants DBI-1262107 and IIS-1646333).

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