TransComb specifications

Information


Unique identifier OMICS_13290
Name TransComb
Software type Package/Module
Interface Graphical user interface
Restrictions to use None
Input data Alignments of RNA-seq reads
Input format BAM
Output data Assembled candidate transcripts
Output format GTF
Operating system Unix/Linux
Programming languages C++
License GNU General Public License version 3.0
Computer skills Medium
Version 1.0
Stability Stable
Maintained Yes

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Maintainer


  • person_outline Juntao Liu <>

Publication for TransComb

TransComb institution(s)
School of Mathematics, Shandong University, Jinan, China; Department of Computer Science and Engineering, University of California, Riverside, CA, USA; MOE Key Lab of Bioinformatics and Bioinformatics Division, TNLIST/Department of Computer Science and Technology, Tsinghua University, Beijing, China; Institute of Integrative of Genome Biology, University of California, Riverside, CA, USA
TransComb funding source(s)
This work was partially supported by the National Natural Science Foundation of China (codes 61432010, 61272016, and 31571354) and the USA National Science Foundation (grants DBI-1262107 and IIS-1646333).

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