Transcription factor binding prediction software tools | Bisulfite sequencing data analysis

Detecting in vivo transcription factor (TF) binding is important for understanding gene regulatory circuitries. ChIP-seq is a powerful technique to empirically define TF binding in vivo. However, the multitude of distinct TFs makes genome-wide…
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Methylphet
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Methylphet

A computational method and software package to predict TF binding using a…

A computational method and software package to predict TF binding using a combination of methylation profiles and genomic features. The idea is based on the observation that in vivo TF binding events…

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