TACO specifications

Unique identifier:
OMICS_17372
Software type:
Package/Module
Restrictions to use:
None
Input format:
GTF
Operating system:
Unix/Linux, Mac OS
Computer skills:
Advanced
Stability:
Stable
Maintained:
Yes
Name:
Transcriptome Assemblies Combined into One
Interface:
Command line interface
Input data:
Any assembly
Output data:
Details on overlap with reference transcript and nature of that overlap.
Programming languages:
C++
Version:
0.7.0
Source code URL:
https://codeload.github.com/tacorna/taco/tar.gz/v0.7.0

versioning

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TACO distribution

download

TACO support

Maintainer

  • Yashar Niknafs <>

Additional information

https://github.com/tacorna/taco/

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Credits

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Publications

Institution(s)

Michigan Center for Translational Pathology, University of Michigan, Ann Arbor, MI, USA; Department of Cellular and Molecular Biology, University of Michigan, Ann Arbor, MI, USA; Department of Statistics, Colorado State University, Fort Collins, CO, USA; Department of Pathology, University of Michigan, Ann Arbor, MI, USA; Howard Hughes Medical Institute, University of Michigan, Ann Arbor, MI, USA; Comprehensive Cancer Center, University of Michigan, Ann Arbor, MI, USA; Department of Urology, University of Michigan, Ann Arbor, MI, USA

Funding source(s)

This work was supported in part by the NIH Prostate Specialized Program of Research Excellence grant P50CA186786, F30 CA 200328, U01CA214170, U24 CA210967 and by the Prostate Cancer Foundation and the Howard Hughes Medical Institute.

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