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Transcriptomic databases

Transcriptome databases steps

Most recent bioinformatics tools

A-WINGS
Dataset

A-WINGS angel wing genome database

Provides integrated genomic and transcriptomic information on the angel’s…

Provides integrated genomic and transcriptomic information on the angel’s wing oyster mushroom. A-WINGS is a web database that contains structure and functional annotations of transcripts and gene…

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VirtualEmbryo
Dataset

VirtualEmbryo

Captures the mean expression patterns of many genes in a common frame despite…

Captures the mean expression patterns of many genes in a common frame despite significant variations in morphology and expression between individual embryos. VirtualEmbryo is a database that contains…

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Amazonia!
Dataset

Amazonia!

Provides a gene-centered database of human gene expression. Amazonia! is an…

Provides a gene-centered database of human gene expression. Amazonia! is an atlas that gathers a selection of publicly available transcriptome datasets which can be consulted via thematic pages. The…

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UNITE
Dataset

UNITE

Provides a database for high-quality reference records of internal transcribed…

Provides a database for high-quality reference records of internal transcribed spacer (ITS) sequences. UNITE is an online resource that targets all fungi and geographical regions, to provide reliable…

Most popular analytical software and databases

Genevestigator
Web

Genevestigator

An innovative online platform to help you interpret your results, prioritize…

An innovative online platform to help you interpret your results, prioritize targets and biomarkers, identify correlated genes, discover novel disease-specific genes, or simply to explore the…

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BSRD
Dataset

BSRD Bacterial Small Regulatory RNA Database

A comprehensive bacterial sRNAs database, as a repository for published…

A comprehensive bacterial sRNAs database, as a repository for published bacterial sRNA sequences with annotations and expression profiles. BSRD contains over nine times more experimentally validated…

dbEMT
Dataset

dbEMT

A literature-based gene resource for exploring epithelial-mesenchymal…

A literature-based gene resource for exploring epithelial-mesenchymal transition (EMT)-related human genes. dbEMT includes literature data, clinical relevant variants, gene expression profiles and…

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RBP-Var
Dataset

RBP-Var

Provides annotation of functional variants involved in post-transcriptional…

Provides annotation of functional variants involved in post-transcriptional interaction and regulation. RBP-Var provides a user-friendly web interface, allowing users to rapidly find whether SNVs of…

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