Bioinformatics tools for transcriptomics

Transcriptomics is the study of the complete set of RNA transcripts produced by a given cell, organ, or living organism. The main focus of transcriptomics is to evaluate differential expression of genes between conditions. High-throughput technologies such as microarray and RNA-sequencing have become the standard for such experiments. Transcriptomics software tools are also used to study RNA modifications, RNA-protein interactions, non-coding RNA and RNA structure.

RNA transcription

Low-level RNA detection

RNA modifications

RNA-Protein interactions

Non-coding RNA

RNA structure