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TRANSFAC

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Provides data on eukaryotic transcription factors, their experimentally-proven binding sites, consensus binding sequences (positional weight matrices) and regulated genes. TRANSCompel contains data on eukaryotic transcription factors experimentally proven to act together in a synergistic or antagonistic manner.

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1 user review

1 user review

Alvaro Sebastian's avatar image Alvaro Sebastian's country flag

Alvaro Sebastian

Probably one of the best annotated and curated resource of transcription factor binding preferences (sites and motifs). The free version (v7.0) is very limited and outdated (year 2005). If you want to have online access to the last version, the academic price is more than 1000$. There are other open access databases that can be considered before paying that price.

TRANSFAC forum

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TRANSFAC classification

  • Animals
  • Fungi
  • Plants
  • Protists

TRANSFAC specifications

Restrictions to use:
License purchase required
Maintained:
Yes
Content license:
Commercial

TRANSFAC support

Maintainer

  • Edgar Wingender <>

Credits

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Publications

Institution(s)

Department of Bioinformatics, Medical School, University of Göttingen, Goldschmidtstr Göttingen, Germany

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