Transgene identification software tools | DNA annotation
Genetically modified organisms are widely used in lifescience research, agriculture and in commercial products. However, in most cases, the genetic modification in the host genome is often less well characterized with respect to integration location, copy number and host gene expression.
Aims to discovers transgene incorporation and rearrangement in the host genome. transgeneR is an application for the identification and characterization of transgene integration and rearrangements events, especially in transgene genome with complex genetic structure. This method considers the properties of transgene events, such as the homologous transgene sequences, complex genetic structure and multiple copies of transgene insertion.
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