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tRanslatome | An R/Bioconductor package to portray translational control

Provides a complete platform for the simultaneous pairwise analysis of transcriptome, translatome and proteome data. tRanslatome includes most of the available statistical methods developed for the analysis of high-throughput data, allowing the parallel comparison of differentially expressed genes and the corresponding differentially enriched biological themes. It will help to study mRNA and protein variations in an exhaustive way, providing specific tools for the comparison of polysomal mRNA with total mRNA or protein data. tRanslatome allows a user-friendly comparison and integration of data generated from two ‘-omics’ measurements, empowering the discovery of regulatory mechanisms underlying the uncoupling processes among the transcriptome, the translatome and the proteome.

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tRanslatome forum

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tRanslatome classification

tRanslatome specifications

Unique identifier:
OMICS_01316
Interface:
Command line interface
Operating system:
Unix/Linux, Mac OS, Windows
License:
GNU Lesser General Public License version 3.0
Stability:
Stable
Software type:
Package/Module
Restrictions to use:
None
Programming languages:
R
Computer skills:
Advanced
Maintained:
Yes

tRanslatome distribution

versioning

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No versioning.

tRanslatome support

Documentation

Credits

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Publications

Institution(s)

Laboratory of Translational Genomics - Centre for Integrative Biology, University of Trento, Mattarello (TN) and Institute of Biophysics CNR, Povo (TN), Italy

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