TranslatorX pipeline

TranslatorX specifications

Information


Unique identifier OMICS_22371
Name TranslatorX
Interface Web user interface
Restrictions to use None
Input data Some nucleotide sequences, protein alignment, genetic code or alignment cleaning.
Computer skills Basic
Version 0.9
Stability Stable
Maintained Yes

Maintainers


  • person_outline Maximilian Telford <>
  • person_outline Federico Abascal <>

Information


Unique identifier OMICS_22371
Name TranslatorX
Software type Application/Script
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux
Programming languages Perl
Computer skills Advanced
Stability Stable
Maintained Yes

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Maintainers


  • person_outline Maximilian Telford <>
  • person_outline Federico Abascal <>

Publication for TranslatorX

TranslatorX IN pipelines

 (2)
2016
PMCID: 4945904
PMID: 27417983
DOI: 10.1038/srep29690

[…] genes (pcgs) were first extracted using purpose-built perl scripts48 based on annotations and then separately aligned according to their corresponding amino acid translations using the software translatorx49. the gaps were not removed as they are known to contain valuable information for phylogenetic analyses50. the concatenated nucleotide sequence alignment from 13 pcgs (total = 11,433 bp) […]

TranslatorX institution(s)
Departamento de Biodiversidad y Biologia Evolutiva, Museo Nacional de Ciencias Naturales, Madrid, Spain; Department of Genetics, Evolution and Environment, University College London, London UK

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