TraPS-VarI specifications

Information


Unique identifier OMICS_20353
Name Transmembrane Protein Sequence Variant Identifier
Software type Package/Module
Interface Command line interface
Restrictions to use None
Input data Some single nucleotide polymorphism mutations.
Input format VCF
Output data A file with the protein position, protein allele change, mutation effect and the motif changes, hits in the ttd database and the DrugBank database.
Operating system Unix/Linux, Windows
Programming languages Python
Database management system MySQL
Computer skills Advanced
Version 0.0.1
Stability Stable
Requirements MySQL-python
Maintained Yes

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Maintainers


  • person_outline Vijay Kumar Ulaganathan <>
  • person_outline Vijay Kumar Ulaganathan <>

TraPS-VarI article

TraPS-VarI institution(s)
Technische Universität München, München, Germany; Max Planck Institute of Biochemistry, Department of Molecular Biology, Martinsried, Germany
TraPS-VarI funding source(s)
Supported by Prof. Dr. Axel Ullrich.

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