TRAPLINE specifications

Unique identifier:
OMICS_10971
Software type:
Pipeline/Workflow
Restrictions to use:
None
Biological technology:
Illumina, Life Technologies
Computer skills:
Basic
High performance computing:
Yes
Name:
Transparent Reproducible and Automated PipeLINE
Interface:
Web user interface
Input format:
FASTQ
Parallelization:
MapReduce
Stability:
Stable
Maintained:
Yes

versioning

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TRAPLINE support

Documentation

Maintainer

  • Olaf Wolkenhauer <>

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Credits

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Publications

Institution(s)

Department of Systems Biology and Bioinformatics, University of Rostock, Rostock, Germany; Reference und Translation Center for Cardiac Stem Cell Therapy (RTC), University of Rostock, Rostock, Germany; Gene & Stem Cell Therapy Program, Centenary Institute, Camperdown, Australia; Gene Center Munich, LMU Munich, Munich, Germany; Stellenbosch Institute of Advanced Study (STIAS), Wallenberg Research Centre at Stellenbosch University, Stellenbosch, South Africa; Sydney Medical School, University of Sydney, Sydney, NSW, Australia

Funding source(s)

Supported by the Federal Ministry of Education and Research Germany (FKZ 0312138A, FKZ 316159 and FKZ 02NUK043C) and the State Mecklenburg-Western Pomerania with EU Structural Funds (ESF/IV-WM-B34-0030/10 and ESF/IV-BM-B35-0010/12), by the DFG (DA 1296–1), the German Heart Foundation (F/01/12), by the FORUN Program of Rostock University Medical Centre (889001) and the EU funded CaSyM project (grant agreement #305033).

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