TRAPID pipeline

TRAPID specifications


Unique identifier OMICS_12125
Interface Web user interface
Restrictions to use None
Input data RAPID supports properly formatted multi-fasta files, with the '>' symbol indicating the transcript identifier of the following sequence. In case the headers of the multi-fasta file consist of multiple sections separated by the '|' symbol, the first section will be used as unique identifier.
Computer skills Basic
Stability Stable
Maintained Yes



  • person_outline Michiel Van Bel <>

Publication for TRAPID

TRAPID IN pipeline

PMCID: 4338194
PMID: 25706301
DOI: 10.1371/journal.pone.0118231

[…] hampering to identify protein family groups., additional functional, comparative and phylogenetic analysis of de novo transcriptome of sgb and b. mori genome was performed using the online tool trapid. of all the groups shown in table 4, many presented gene expansion or depletion among the gene families identified. in the serine protease group, the most notorious change occurred in family […]

TRAPID institution(s)
Department of Plant Systems Biology, VIB-Universiteit Gent, Gent, Belgium; Department of Plant Biotechnology and Bioinformatics, Ghent University, Gent, Belgium; University of Potsdam, Institute of Biochemistry and Biology, Potsdam-Golm, Germany; Max-Planck Institute of Molecular Plant Physiology, Potsdam-Golm, Germany; Department of Pharmaceutics, Ghent University, Gent, Belgium; Department of Genetics, Genome Research Institute, University of Pretoria, Pretoria, South Africa

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