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Protocols

TRAVeLer specifications

Information


Unique identifier OMICS_24043
Name TRAVeLer
Software type Application/Script
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux
Programming languages C++
License GNU General Public License version 3.0
Computer skills Advanced
Version 2.0
Stability Stable
Requirements
g++
Source code URL https://codeload.github.com/davidhoksza/traveler/tar.gz/v2.0-bakalarka
Maintained Yes

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Versioning


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Maintainer


  • person_outline David Hoksza

Publication for TRAVeLer

library_books

TRAVeLer: a tool for template-based RNA secondary structure visualization

2017 BMC Bioinformatics
PMCID: 5688744
PMID: 29141608
DOI: 10.1186/s12859-017-1885-4

TRAVeLer citations

 (8)
library_books

Assessment of Community Event–Based Surveillance for Ebola Virus Disease, Sierra Leone, 2015

2016
PMCID: 4982166
PMID: 27434608
DOI: 10.3201/eid2208.160205

[…] us transmission: 1) >2 sick or dead members in a household, 2) a sick or dead person after an unsafe burial or corpse washing, 3) a sick or dead health worker or traditional healer, 4) a sick or dead traveler, 5) a sick or dead contact of an EVD patient, or 6) an unsafe burial or corpse washing. A seventh category, “other,” was included so that community health monitors could report and describe o […]

library_books

Animal Associated Exposure to Rabies Virus among Travelers, 1997–2012

2015
PMCID: 4378464
PMID: 25811076
DOI: 10.3201/eid2104.141479

[…] inel sites and require rabies PEP are young adult (15–44 years of age) tourists traveling from high-income regions to visit low- and low-middle–income regions. This profile corresponds to the overall traveler population seen at GeoSentinel sites (). This apparent lack of distinction is important because the demographic characteristics of travelers exposed to potentially rabid animals did not diffe […]

call_split

Imported pediatric malaria at the hospital for sick children, Toronto, Canada: a 16 year review

2014
PMCID: 4287547
PMID: 25281037
DOI: 10.1186/1471-2431-14-251
call_split See protocol

[…] ded in our study.After identifying cases, all medical charts were reviewed for demographic, history, laboratory, treatment and intervention data.Migration history extracted from the chart included 1) traveler/tourist from or to Canada, 2) a resident of Canada who was travelling abroad visiting friends or relatives 3) a recent immigrant to Canada 4) a recent refugee to Canada.A person whose travel […]

library_books

High Rates of Antimicrobial Drug Resistance Gene Acquisition after International Travel, the Netherlands

2014
PMCID: 3966371
PMID: 24655888
DOI: 10.3201/eid2004.131718

[…] We calculated differences in relative resistance gene abundances between samples from before and after travel for each traveler by using the ΔΔCt method with a Pfaffl modification to correct for PCR efficiency (ratio: Etarget^ΔCTtarget/Ereference^ΔCTreference) (), which is the standard method to measure the relative c […]

library_books

Travel associated Antimicrobial Drug–Resistant Nontyphoidal Salmonellae, 2004–2009

2014
PMCID: 3966386
PMID: 24655581
DOI: 10.3201/eid2004.131063

[…] d to eastern or Southeast Asia were less likely to be hospitalized than were those who had not recently traveled internationally (OR 0.4, 95% CI 0.2–1.2). This finding might be explained by a healthy traveler effect; thus, the association between resistance and travel to eastern and Southeast Asia cannot be explained by biased case ascertainment (). The use of 2 laboratories for susceptibility tes […]

library_books

Capture–Recapture Method for Estimating Annual Incidence of Imported Dengue, France, 2007–2010

2013
PMCID: 3837679
PMID: 24188574
DOI: 10.3201/eid1911.120624

[…] s already established or is likely to become established. In our study, the observed geographic origin of imported cases can probably be simultaneously explained by the global epidemiology of dengue, traveler flows to France, and the practices used to request laboratory diagnosis. Travelers returning from Antilles during intense dengue epidemics were among those who introduced the greatest number […]

Citations

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TRAVeLer institution(s)
Faculty of Mathematics and Physics, Charles University, Prague, Czech Republic
TRAVeLer funding source(s)
Supported by the Czech Science Foundation grant 15-00885S.

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