Trawler specifications

Information


Unique identifier OMICS_06287
Name Trawler
Alternative names TrawlerWeb, trawler_standalone
Software type Package/Module
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux, Mac OS, Windows
Programming languages Perl
License BSD 3-clause “New” or “Revised” License, MIT License
Computer skills Advanced
Version 1.2
Stability Stable
Requirements
Java, Ghostscript, Algorithm-Cluster
Maintained Yes

Taxon


  • Invertebrates
    • Caenorhabditis elegans
    • Drosophila melanogaster
  • Plants and Fungi
    • Arabidopsis thaliana
    • Saccharomyces cerevisiae
  • Primates
    • Homo sapiens
  • Rodents
    • Mus musculus
    • Rattus norvegicus
  • Vertebrates
    • Danio rerio
    • Gallus gallus
    • Xenopus tropicalis

Download


Versioning


Add your version

Documentation


Maintainers


  • person_outline Benedict Paten <>
  • person_outline Mirana Ramialison <>
  • person_outline Laurence Ettwiller <>
  • person_outline Yannick Haudry <>

Information


Unique identifier OMICS_06287
Name Trawler
Alternative names TrawlerWeb, trawler_standalone
Interface Web user interface
Restrictions to use None
Input format BED,FASTA
Programming languages Java, Perl
Computer skills Basic
Stability Stable
Maintained Yes

Taxon


  • Invertebrates
    • Caenorhabditis elegans
    • Drosophila melanogaster
  • Plants and Fungi
    • Arabidopsis thaliana
    • Saccharomyces cerevisiae
  • Primates
    • Homo sapiens
  • Rodents
    • Mus musculus
    • Rattus norvegicus
  • Vertebrates
    • Danio rerio
    • Gallus gallus
    • Xenopus tropicalis

Documentation


Maintainers


  • person_outline Benedict Paten <>
  • person_outline Mirana Ramialison <>
  • person_outline Laurence Ettwiller <>
  • person_outline Yannick Haudry <>

Publications for Trawler

Trawler institution(s)
Australian Regenerative Medicine Institute, Systems Biology Institute Australia, Monash University, Clayton, VIC, Australia; eResearch, Monash University, Clayton, VIC, Australia; UC Santa Cruz Genomics Institute, University of California, Santa Cruz, CA, USA; Department of Biochemistry and Molecular Biology, Bio21 Institute and Cell Signalling Research Laboratories, The University of Melbourne, Melbourne, VIC, Australia; CNRS, Inserm, Institute of Biology Valrose, Université Côte d’Azur, Nice, France; School of Biomedical Sciences, The University of Queensland, Brisbane, QLD, Australia; Centre for Innate Immunity and Infectious Diseases, Hudson Institute of Medical Research, Monash University, Clayton, VIC, Australia; Department of Biochemistry and Molecular Biology, Monash University, Clayton, VIC, Australia; Faculty of Information Technology, Monash University, Clayton, VIC, Australia; Murdoch Children’s Research Institute, The Royal Children’s Hospital, Parkville, VIC, Australia; Department of Physiology, School of Biomedical Sciences, The University of Melbourne, Parkville, VIC, Australia
Trawler funding source(s)
Supported by an Australian Research Council Discovery Project grant (DP1049980), a National Health and Medical Research Council/ Heart Foundation Career Development Fellowship (1049980), Sun Foundation and UROP scholarships.

Trawler reviews

star_border star_border star_border star_border star_border
star star star star star

Be the first to review Trawler