T-BAS specifications

Unique identifier:
OMICS_14381
Interface:
Web user interface
Input data:
Curated alignments of sequence data for the selected taxa or a FASTA formatted file with unknown query sequences.
Output data:
Separate or concatenated alignments.
Programming languages:
Javascript, PHP, Python
Version:
1.0
Maintained:
Yes
Name:
Tree-Based Alignment Selector
Restrictions to use:
None
Input format:
FASTA
Output format:
PHYLIP, FASTA, XML, CSV, NEXUS
Computer skills:
Basic
Stability:
Stable

T-BAS support

Maintainer

  • Ignazio Carbone <>

Additional information

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Publications

Institution(s)

Center for Integrated Fungal Research, Department of Entomology and Plant Pathology, North Carolina State University, Raleigh, NC, USA; Department of Biology, Duke University, Durham, NC, USA; School of Plant Sciences, The University of Arizona, Tucson, AZ, USA; Department of Ecology and Evolutionary Biology, The University of Arizona, Tucson, AZ, USA; San Diego Supercomputer Center, University of California, San Diego, La Jolla, CA, USA; Department of Medicine, University of Giessen, Giessen, Germany; Department of Ecology, Evolution and Behavior, University of Minnesota, Saint Paul, MN, USA

Funding source(s)

Funding for the development of T-BAS was provided by the National Science Foundation (NSF) Dimensions of Biodiversity (DoB) (DEB-1046167, DEB-1045766 and DEB-1046065).

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