TreeCmp specifications

Information


Unique identifier OMICS_14019
Software type Package/Module
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux
Programming languages Java
Computer skills Advanced
Stability Stable
Maintained No

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TreeCmp article

TreeCmp citation

2016
PMCID: 5127522

[…] proportion of invariant sites being allowed to vary between partitions. the computation was stopped when the average standard deviation of split frequencies was less than 0.01. as with experiment 2, treecmp [43] was used to compare pairs of trees across the four metrics: robinson-foulds distance, estabrook’s quartet distance, steel and penny’s path difference distance and the authors’ […]

TreeCmp institution(s)
Department of Algorithms and Systems Modelling, Faculty of Electronics, Telecommunication and Informatics, Gdansk University of Technology, Gdańsk, Poland; Systems Modelling Laboratory, Institute of Oceanology, Polish Academy of Sciences, Sopot, Poland; Evolutionary Systems Laboratory, Adam Mickiewicz University, Poznan, Poland
TreeCmp funding source(s)
This work was supported by the Polish Ministry of Science and Education (grant n°N303 291234) and the Polish National Science Centre (grant n°DEC-2011/02/A/ST6/00201).

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