Performs a variety of useful trimming tasks for illumina paired-end and single ended data.

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1 user review

1 user review

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tnov

Very useful Java tool for adapater trimming, low quality sequence removal, etc.. We are using it almost daily in our DNASeq/RNASeq pipelines.

Trimmomatic forum

No open topic.

Trimmomatic versioning

No versioning.

Trimmomatic classification

Trimmomatic specifications

Software type:
Package
Restrictions to use:
None
Operating system:
Unix/Linux, Mac OS, Windows
Stability:
Stable
Interface:
Command line interface
Biological technology:
Illumina
Computer skills:
Advanced

Credits

Publications

  • (Bolger et al., 2014) Trimmomatic: A flexible trimmer for Illumina Sequence Data. Bioinformatics.
    Published on: 2014 Aug 01
    PMID: 24695404

Link to literature

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