Tripal statistics

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Citations per year

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Popular tool citations

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Tool usage distribution map

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Associated diseases

Associated diseases

Tripal specifications

Information


Unique identifier OMICS_06253
Name Tripal
Software type Package/Module, Toolkit/Suite
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux
License GNU General Public License version 2.0
Computer skills Advanced
Version 3.0
Stability Stable
Maintained Yes

Subtools


  • Tripal Analysis Expression module
  • Tripal Elasticsearch module

Download


Versioning


Add your version

Documentation


Maintainer


  • person_outline Margaret Staton <>

Additional information


http://tripal.info/tutorials/v3.x

Publications for Tripal

library_books

Tripal Developer Toolkit.

2018 Database
PMCID: 6147213
PMID: 30295719
DOI: 10.1093/database/bay099

Tripal in publications

 (7)
PMCID: 5909171
PMID: 29706973
DOI: 10.3389/fpls.2018.00418

[…] blast, browse, download., third, databases should be maintained for at least 3 years. good maintenance secures a steady population of users whereas a bad one will only narrow its academic impact., tripal is a member of the generic model organism database (gmod) organization suite of genome tools. the first official version of tripal was released in 2009 by stephen ficklin and meg staton […]

PMCID: 5830435
PMID: 29507735
DOI: 10.1038/s41438-018-0016-3

[…] (gdr—http://rosaceae.org/). with this infrastructure, fruibreedomics data landscape were aligned to gdr, easing data exchange between the two projects., on top of this chado database, a drupal/tripal interface has been developed, integrating several tools. two are the objectives of this web application: to leverage the interconnections between several separated datasets collected […]

PMCID: 5698859
PMID: 29201542
DOI: 10.1002/brb3.836

[…] their effects on mood and cognitive outcomes, as well as their potential effects on sphingolipid concentrations (alexander, gallagher, mascola, moloney, & stafford, ; hori et al., ; kornhuber, tripal, gulbins, & muehlbacher, ; kornhuber et al., ). patients diagnosed with any dementia, parkinson's disease, huntington's chorea, an autoimmune disease (e.g., multiple sclerosis, rheumatoid […]

PMCID: 5590110
PMID: 28882177
DOI: 10.1186/s13104-017-2784-5

[…] colony morphology, gram’s stain and biochemical tests [, ]. the common biochemical tests used were oxidase test, catalase test, sulphur indole motility test, urease test, citrate utilization test, tripal sugar iron agar test, methyl red and voger-proskauer test, coagulase test, bile esculin agar test etc., the antimicrobial susceptibility testing was performed using kirby-bauer disc diffusion […]

PMCID: 3713027
PMID: 23874666
DOI: 10.1371/journal.pone.0068551

[…] into an online database called genenet engine which is available online at http://sysbio.genome.clemson.edu. the data is housed in a chado database schema with custom tables and visualized using tripal . next all available rice snps from ncbi’s dbsnp database were uniquely mapped to the rice genome and loaded into the database so that an end-user can identify proximal biomarkers […]


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Tripal institution(s)
Department of Entomology and Plant Pathology, University of Tennessee Institute of Agriculture, Knoxville, TN, USA; Graduate School of Genome Science and Technology, University of Tennessee, M411 Walters Life Science, Knoxville, TN, USA
Tripal funding source(s)
Supported by National Science Foundation (#1443040 and #1444573).

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