TriPoly specifications


Unique identifier OMICS_26889
Name TriPoly
Software type Package/Module
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux
Programming languages Python
Computer skills Advanced
Version 1.2
Stability Stable
Maintained Yes



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  • person_outline Chris Maliepaard <>

Publication for TriPoly

TriPoly in publications

PMCID: 5915555
PMID: 29720992
DOI: 10.3389/fpls.2018.00513

[…] number of different polyploid haplotyping tools (for sequence reads) have been developed in recent years, including polyhap (), satlotyper (), hapcompass (), haptree (), sdhap (), shesisplus (), and tripoly (motazedi et al., unpublished). three of these tools (hapcompass, haptree, and sdhap) were recently compared and evaluated over a range of different simulated read depths, ploidy levels […]

PMCID: 5859374
PMID: 29593701
DOI: 10.3389/fmicb.2018.00470

[…] acid (well e7); isolate c1 from cucumber could utilize all tested phosphorus substrates except dithiophosphate (well b2); and isolate s1 from strawberry could metabolize all tested phosphorus except tripoly-phosphate (well a5), phosphono acetic acid (well e6), 2-aminoethyl phosphonic acid (well e7), or methylene diphosphonic acid (well e8). for sulfur substrates, more than 34 were metabolized. […]

PMCID: 5795045
PMID: 29399580
DOI: 10.7774/cevr.2018.7.1.51

[…] containing the recombinant intimin and antibody titer was evaluated then challenge assay performed against e. coli o157:h7., chitosan with medium molecular weight, sigma-aldrich, (germany), sodium tripoly phosphatase tpp (scharlau, spain) were used. chemical material, kits, and molecular markers from merck (germany), sinagen (iran), qiagen (germany) were also prepared., the vector pet28a […]

PMCID: 5144137
PMID: 27929107
DOI: 10.1038/srep38628

[…] make ci happen in trivalent counterion solution by adding ethanol to decrease the dielectric constant of medium, which is realized in trivalent counterion solutions of spermidine ([c7n3h22]3+) and tripoly-lysine (k3). meanwhile, we also show the opposite process to neutralize dna ci by adding amino-carboxylic acids (glycine, 6-aminocaproic acid (6-a)) to the solution of counterions having 4 […]

PMCID: 4589381
PMID: 26422367
DOI: 10.1371/journal.pone.0137805

[…] (nh4cl), ammonium hydroxide (nh4oh) and ammonium hydrogen fluoride (nh4fhf < 1%, ld50 mg/kg not found) of analytical-reagent grade (thermo fisher scientific, usa). chemicals of food grade: sodium tripoly phosphate (na5p3o10) (a. b. corneliussen as, norway), na-lactate (c3h5nao3) (purac biochem, gorichem, the netherlands) and sodium nitrite (nnao2)(merck, kgaa darmstadt, germany)., the imaging […]

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TriPoly institution(s)
Bioinformatics Group, Wageningen University and Research, The Netherlands; Wageningen UR Plant Breeding, Wageningen, The Netherlands
TriPoly funding source(s)
Supported by the graduate school Experimental Plant Sciences (EPS) and Wageningen University and Research (WUR).

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