TSPM.R specifications


Unique identifier OMICS_01960
Software type Package/Module
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux, Mac OS, Windows
Programming languages R
Computer skills Advanced
Stability Stable
Maintained Yes


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  • person_outline Paul Auer <>

TSPM.R in publication

PMCID: 3541212
PMID: 22849430
DOI: 10.1186/2045-3701-2-26

[…] and "deviance()" can be used to obtain the likelihood ratio statistics. the detailed r code for p values can be downloaded from the author’s website (http://www.stat.purdue.edu/~doerge/software/tspm.r), last accessed on 03/07/2012., under the model assumptions, the authors demonstrated that the two-stage poisson model is a powerful tool for detecting differentially expressed genes. however, […]

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TSPM.R institution(s)
Fred Hutchinson Cancer Research Center, Seattle, WA, USA; Purdue University, West Lafayette, IN, USA
TSPM.R funding source(s)
Supported by a National Science Foundation Plant Genome grant (DBI-0733857).

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