tsRFinder statistics

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Citations per year

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Associated diseases

Associated diseases

tsRFinder specifications


Unique identifier OMICS_05774
Name tsRFinder
Software type Package/Module
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux, Mac OS
Programming languages C, Perl, R
License MIT License
Computer skills Advanced
Stability Stable
Maintained Yes


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tsRFinder in publication

PMCID: 5177647
PMID: 28066490
DOI: 10.3389/fpls.2016.01938

[…] in supplemental table . the degradome sequencing reads were mapped to the reference sequence via bowtie ()., the re-sequenced p. sojae tsrnas were analyzed using in-house tsrna annotation pipeline tsrfinder with its default parameters. all the reference tsrna sequences were list in supplemental table ., for manual cloning of tsrnas, srnas ranging from 15 to 50 nt in size were isolated […]

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