TSSAR specifications

Unique identifier:
OMICS_03523
Restrictions to use:
None
License:
Apache License version 2.0, GNU General Public License version 2.0
Stability:
Stable
Interface:
Web user interface
Programming languages:
Java, Perl, R
Computer skills:
Basic
Maintained:
Yes

TSSAR distribution

download

TSSAR support

Maintainer

  • Fabian Amman <>

Additional information

http://nibiru.tbi.univie.ac.at/TSSAR/workflow

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Publications

Institution(s)

Bioinformatics Group, Department of Computer Science and the Interdisciplinary Center for Bioinformatic, University of Leipzig, Leipzig, Germany; Institute for Theoretical Chemistry, University
of Vienna, Vienna, Austria; Center for Integrative Bioinformatics Vienna (CIBIV), Max F. Perutz Laboratories, University of Vienna, Medical University of Vienna, Vienna, Austria; Department of Biochemistry and Molecular Cell Biology, Max F. Perutz Laboratories, University of Vienna, Vienna, Austria; Center for RNA in Technology and Health, University of Copenhagen, Frederiksberg C, Denmark; Max Planck Institute for Mathematics in the Sciences, Leipzig, Germany; Fraunhofer Institute for Cell Therapy and Immunology, Leipzig, Germany; Santa Fe Institute, Santa Fe, NM, USA; Research group Bioinformatics and Computational Biology, Faculty of Computer Science, University of Vienna, Vienna, Austria

Funding source(s)

Supported by the Austrian Science Fund (FWF) projects “In silico annotation of noncoding RNAs and their targets” (AF 0430511), “RNA regulation of the transcriptome” (F43), the German ministry of science (0316165C as part of the e:Bio initiative), and the Deutsche Forschungsgemeinschaft (STA 850/10–2 within the SPP 1258 “Sensory and regulatory RNAs in Prokaryotes”).

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1 user review

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Amr Galal's avatar image Amr Galal's country flag

Amr Galal

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The tools is great, powerful and better than others for detect TSS
just the web tool doesn't give same results as the stand alone one using same parameters